CHINESE JOURNAL OF OIL CROP SCIENCES ›› 2022, Vol. 44 ›› Issue (6): 1173-1181.doi: 10.19802/j.issn.1007-9084.2021276
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Jing-xiu YE(), Hai-dong LIU(
), Xiao-rong XING, Jun LI, De-zhi DU(
)
Received:
2021-11-01
Online:
2022-12-25
Published:
2022-11-24
Contact:
De-zhi DU
E-mail:sdyejingxiu@163.com;dahaima@163.com;qhurape@126.com
CLC Number:
Jing-xiu YE, Hai-dong LIU, Xiao-rong XING, Jun LI, De-zhi DU. Relationship between chlorophyll content and yield and development of chlorophyll major QTL cqSPDA2 linkage marker in Brassica napus[J]. CHINESE JOURNAL OF OIL CROP SCIENCES, 2022, 44(6): 1173-1181.
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URL: http://www.jouroilcrops.cn/EN/10.19802/j.issn.1007-9084.2021276
Table 1
Primer sequences of KASP designed in this study
SNP 位置 SNP position | SNP标记 SNP marker | 序列(5' -3') Sequence(5' -3') |
---|---|---|
BSNP88F1 | GAAGGTCGGAGTCAACGGATTAGAACTCCCTTGAGAAATGAAAA | |
Bn-A02-p23669898 | BSNP88F2 | GAAGGTGACCAAGTTCATGCTAGAACTCCCTTGAGAAATGAAAG |
BSNP88R1 | GGTTGTTTCTCCTAGCATCTATGA | |
BSNP89F1 | GAAGGTCGGAGTCAACGGATTCTTGTGATTTATCTCGCCACA | |
Bn-A02-p24462762 | BSNP89F2 | GAAGGTGACCAAGTTCATGCTCTTGTGATTTATCTCGCCACG |
BSNP89R1 | TCTTTATCAGAGACAACGAACTCC | |
BSNP90F1 | GAAGGTCGGAGTCAACGGATTTGCACAAAGATCTGGTCTTTAATA | |
Bn-A02-p23842103 | BSNP90F2 | GAAGGTGACCAAGTTCATGCTGCACAAAGATCTGGTCTTTAATG |
BSNP90R1 | ATGAAGATTCTGATGCCATGG | |
BSNP91F1 | GAAGGTCGGAGTCAACGGATTTTACCTCATTTTCTTGAGTAAGTGC | |
Bn-A02-p23875682 | BSNP91F2 | GAAGGTGACCAAGTTCATGCTCATTACCTCATTTTCTTGAGTAAGTGT |
BSNP91R1 | CTCTGATCGGCCTTCTGATG | |
BSNP92F1 | GAAGGTCGGAGTCAACGGATTCATTCTGACACAAGGAGTCTGAA | |
Bn-A02-p24015556 | BSNP92F2 | GAAGGTGACCAAGTTCATGCTCATTCTGACACAAGGAGTCTGAG |
BSNP92R1 | GATTGCAGACACTTTAATAGCTTG | |
BSNP94F1 | GAAGGTCGGAGTCAACGGATTGAAGTACGAAATAAGGAGAGCTGT | |
Bn-A02-p25687470 | BSNP94F2 | GAAGGTGACCAAGTTCATGCTGAAGTACGAAATAAGGAGAGCTGG |
BSNP94R1 | ACATCTGTCACGTAATTCATTGG | |
BSNP95F1 | GAAGGTCGGAGTCAACGGATTCATAGAAAACAATGTGTCGTCTCTT | |
Bn-A02-p24399308 | BSNP95F2 | GAAGGTGACCAAGTTCATGCTCATAGAAAACAATGTGTCGTCTCTC |
BSNP95R1 | CATTGACCCAGACTTGCATGA | |
BSNP96F1 | GAAGGTCGGAGTCAACGGATTCACCACATTCAGTTGCATCAGA | |
Bn-A02-p24438115 | BSNP96F2 | GAAGGTGACCAAGTTCATGCTACCACATTCAGTTGCATCAGC |
BSNP96R1 | TACCATAAGCTTGTGTCAGCTTC | |
BSNP97F1 | GAAGGTCGGAGTCAACGGATTGCTCGTTTGGCTCATAGACCTA | |
Bn-A02-p24718110 | BSNP97F2 | GAAGGTGACCAAGTTCATGCTCTCGTTTGGCTCATAGACCTC |
BSNP97R1 | GTAAATTTGCTTATGCGGCC | |
BSNP98F1 | GAAGGTCGGAGTCAACGGATTCAAACGAAACCGTTAGCGAA | |
Bn-A02-p24851624 | BSNP98F2 | GAAGGTGACCAAGTTCATGCTCAAACGAAACCGTTAGCGAG |
BSNP98R1 | CTCACTAGTTGATTATTTCTCTGGTG | |
BSNP99F1 | GAAGGTCGGAGTCAACGGATTTGGGTTTTCTTTTCAATTCATAA | |
Bn-A02-p24827362 | BSNP99F2 | GAAGGTGACCAAGTTCATGCTTGGGTTTTCTTTTCAATTCATAG |
BSNP99R1 | ACTAACATCTCAACGATTCGATTAC | |
BSNP101F1 | GAAGGTCGGAGTCAACGGATTCACCAGGTGGAGGCATTGTA | |
Bn-A02-p25022921 | BSNP101F2 | GAAGGTGACCAAGTTCATGCTCACCAGGTGGAGGCATTGTG |
BSNP101R1 | GTTGGGGAATGGAGATTTGAC |
Table 2
Primer sequences designed in this study
标记 Marker | 类型 Type | 正向引物(5’-3’) Forward primer (5’-3’) | 反向引物(5’-3’) Reverse primer (5’-3’) |
---|---|---|---|
Indel1 | InDel | AAATCTACATCACACCAAAGC | GCCTTGTTGGGTCTTTTAT |
Indel3 | InDel | GTCCACACCAAATCCACTAC | TGCTAGGAGAAACAACCTGT |
Indel15 | InDel | AACATCGCCATTGTAAGTCT | CAACTGCAACACAACAATTT |
Indel87 | InDel | TCTTTCTGCTCAAAGGTTGT | AGGGTTTAAAAAGTCCCAAC |
Table 3
Statistical table of sequencing data
样品 Sample | Reads | Base | GC含量 GC /% | 大于20的碱基百分比 Q20 /% | 大于30的碱基百分比 Q30 /% |
---|---|---|---|---|---|
PH | 50 691 532 | 15 026 533 367 | 38.72 | 98.24 | 94.02 |
PL | 51 575 856 | 15 264 330 975 | 39.27 | 98.05 | 93.55 |
CH | 140 726 217 | 41 489 862 358 | 36.68 | 98.44 | 95.35 |
CL | 159 025 547 | 46 923 084 330 | 36.45 | 98.38 | 95.05 |
Mean | 100 504 788 | 29 675 952 758 | 37.78 | 98.28 | 94.49 |
Sum | 402 019 152 | 118 703 811 030 | - | - | - |
Table 5
Correlation analysis between chlorophyll content of DH population and yield per plant
西宁 Xining | 互助 Huzhu | ||||||
---|---|---|---|---|---|---|---|
叶绿素值SPAD | 单株产量 Yield per plant /g | 相关系数 Correlation | 叶绿素值SPAD | 单株产量 Yield per plant /g | 相关系数 Correlation | ||
范围Range | 均值Mean | 范围Range | 均值Mean | ||||
46.00~49.57 | 47.13±1.06 | 12.85±1.37A | 0.163**(n=282) | 47.09-51.09 | 48.45±0.91 | 10.86±1.50A | 0.273**(n=282) |
42.00~45.95 | 43.94±1.15 | 11.65±1.50B | 0.391**(n=150) | 43.01-46.94 | 44.96±1.11 | 9.79±1.81B | 0.486**(n=150) |
38.19~41.98 | 40.85±0.94 | 11.31±1.76C | 0.762**(n=50) | 39.23-42.95 | 42.13±1.01 | 9.11±1.62C | 0.789**(n=50) |
Table 6
Analysis of agronomic characters of different chlorophyll content and genotype with BC4F2:3 lines
性状 Trait | BC4F2:3基因型 | |||
---|---|---|---|---|
AA1 | aa1 | AA2 | aa2 | |
株高 /cm | 184.27±4.62 | 177.67±6.09 | 180.95±4.79 | 173.37±4.23 |
主花序角果数 | 57.16±4.07 | 46.03±3.26* | 52.33±8.49 | 44.87±6.37 |
全株有效角果数 | 219.37±6.57 | 151.66±15.21** | 208.67±21.29 | 141.60±7.29 |
果长 /cm | 93.36±3.68 | 93.98±1.59 | 89.90±1.68 | 89.08±0.79 |
每10果粒数 | 251.25±997 | 236.63±7.08 | 263.19±6.24 | 212.97±4.73** |
千粒重 /g | 3.75±0.24 | 3.86±0.41 | 3.36±0.13 | 3.50±0.12 |
单株产量 /g | 18.29±0.36 | 11.27±1.20** | 16.57±2.08 | 10.50±0.59** |
1 |
李媛媛, 沈金雄, 王同华, 等. 利用SRAP、SSR和AFLP标记构建甘蓝型油菜遗传连锁图谱[J]. 中国农业科学, 2007, 40(6): 1118-1126. DOI:10.3321/j.issn: 0578-1752.2007.06.005 .
doi: 10.3321/j.issn: 0578-1752.2007.06.005 |
2 | 陈兆波, 余健. 我国油菜生产形势分析及科研对策研究[J]. 中国油料作物学报, 2010, 32(2): 303-308. |
3 | 王汉中. 我国油菜产业发展的历史回顾与展望[J]. 中国油料作物学报, 2010, 32(2): 300-302. |
4 |
刘红艳, 赵应忠. 芝麻花期叶绿素含量变化及其与产量性状的相关分析[J]. 中国油料作物学报, 2007, 29(4): 443-447. DOI:10.3321/j.issn: 1007-9084.2007.04.016 .
doi: 10.3321/j.issn: 1007-9084.2007.04.016 |
5 |
Zhang K P, Fang Z J, Liang Y, et al. Genetic dissection of chlorophyll content at different growth stages in common wheat[J]. J Genet, 2009, 88(2): 183-189. DOI:10.1007/s12041-009-0026-x .
doi: 10.1007/s12041-009-0026-x |
6 |
Avenson T J, Cruz J A, Kanazawa A, et al. Regulating the proton budget of higher plant photosynthesis[J]. PNAS, 2005, 102(27): 9709-9713. DOI:10.1073/pnas.0503952102 .
doi: 10.1073/pnas.0503952102 |
7 |
Xu Y F, Ookawa T, Ishihara K. Analysis of the photosynthetic characteristics of the high-yielding rice cultivar Takanari[J]. Japanese Journal Crop Science, 1997, 66(4): 616-623. DOI:10.1626/jcs.66.616 .
doi: 10.1626/jcs.66.616 |
8 |
Teng S, Qian Q, Zeng D L, et al. QTL analysis of leaf photosynthetic rate and related physiological traits in rice (Oryza sativa L.)[J]. Euphytica, 2004, 135(1): 1-7. DOI:10.1023/b: euph.0000009487.89270.e9 .
doi: 10.1023/b: euph.0000009487.89270.e9 |
9 |
Zhang G H, Xu Q, Zhu X D, et al. SHALLOT-LIKE1 is a KANADI transcription factor that modulates rice leaf rolling by regulating leaf abaxial cell development[J]. Plant Cell, 2009, 21(3): 719-735. DOI:10.1105/tpc.108.061457 .
doi: 10.1105/tpc.108.061457 |
10 | 屠曾平. 水稻光合特性研究与高光效育种[J]. 中国农业科学, 1997(3): 28-35. |
11 |
欧阳杰, 王楚桃, 何光华, 等. 水稻灌浆中后期功能叶中叶绿素含量及其变化趋势与谷物产量关系研究[J]. 西南农业学报, 2012, 25(4): 1201-1204. DOI:10.16213/j.cnki.scjas.2012.04.040 .
doi: 10.16213/j.cnki.scjas.2012.04.040 |
12 | 周振翔. 水稻叶片叶绿素含量对光合生理及产量的影响[D]. 扬州: 扬州大学, 2016. |
13 | 苏其红. 干旱调控小麦花后旗叶叶绿素含量和产量相关性状变异的遗传剖析[D]. 兰州: 甘肃农业大学, 2018. |
14 |
徐澜, 高志强, 安伟, 等. 冬麦春播条件下旗叶光合特性、叶绿素荧光参数变化及其与产量的关系[J]. 应用生态学报, 2016, 27(1): 133-142. DOI:10.13287/j.1001-9332.201601.033 .
doi: 10.13287/j.1001-9332.201601.033 |
15 |
崔世友, 喻德跃. 大豆不同生育时期叶绿素含量QTL的定位及其与产量的关联分析[J]. 作物学报, 2007, 33(5): 744-750. DOI:10.3321/j.issn: 0496-3490.2007.05.008 .
doi: 10.3321/j.issn: 0496-3490.2007.05.008 |
16 |
苏云松, 郭华春, 陈伊里. 马铃薯叶片SPAD值与叶绿素含量及产量的相关性研究[J]. 西南农业学报, 2007, 20(4): 690-693. DOI:10.16213/j.cnki.scjas.2007.04.020 .
doi: 10.16213/j.cnki.scjas.2007.04.020 |
17 |
Gao J Q, Pu H M, Zhang J F, et al. Correlation analysis of SPAD value with chlorophyll content and economic yield traits of Brassica napus L[J]. 农业科学与技术: 英文版, 2013, 14(10): 1421-1428. DOI:10.16175/j.cnki.1009-4229.2013.10.019 .
doi: 10.16175/j.cnki.1009-4229.2013.10.019 |
18 | 梁颖, 李加纳, 唐章林, 等. 油菜光合生理指标与产量的关联分析[J]. 西南农业大学学报, 1999, 21(3): 244-247. |
19 |
Zhu L X, Zeng X H, Chen Y L, et al. Genetic characterisation and fine mapping of a chlorophyll-deficient mutant (BnaC.ygl) in Brassica napus [J]. Mol Breed, 2014, 34(2): 603-614. DOI:10.1007/s11032-014-0060-0 .
doi: 10.1007/s11032-014-0060-0 |
20 |
Wang Y K, He Y J, Yang M, et al. Fine mapping of a dominant gene conferring chlorophyll-deficiency in Brassica napus [J]. Sci Rep, 2016, 6: 31419. DOI:10.1038/srep31419 .
doi: 10.1038/srep31419 |
21 |
Ye J X, Liu H D, Zhao Z, et al. Fine mapping of the QTL cqSPDA2 for chlorophyll content in Brassica napus L[J]. BMC Plant Biol, 2020, 20(1): 511. DOI:10.1186/s12870-020-02710-y .
doi: 10.1186/s12870-020-02710-y |
22 |
王亚琴, 施军琼, 张婷, 等. 水稻黄绿叶突变体ygl13的鉴定及候选基因分析[J]. 中国农业科学, 2015, 48(21): 4197-4208. DOI:10.3864/j.issn.0578-1752.2015.21.001 .
doi: 10.3864/j.issn.0578-1752.2015.21.001 |
23 |
Guo P G, Baum M, Varshney R K, et al. QTLs for chlorophyll and chlorophyll fluorescence parameters in barley under post-flowering drought[J]. Euphytica, 2008, 163(2): 203-214. DOI:10.1007/s10681-007-9629-6 .
doi: 10.1007/s10681-007-9629-6 |
24 |
许小江, 黄伟忠, 何勇. 低温弱光下南瓜叶绿素荧光参数等变化及其与品种耐性的关系[J]. 核农学报, 2015, 29(11): 2231-2238. DOI:10.11869/j.issn.100-8551.2015.11.2231 .
doi: 10.11869/j.issn.100-8551.2015.11.2231 |
25 |
王晓丹, 胡庆一, 张振乾, 等. 不同肥密条件对甘蓝型油菜叶绿素含量及脂肪酸合成相关基因表达量影响的研究[J]. 华北农学报, 2018, 33(1): 127-134. DOI:10.7668/hbnxb.2018.01.020 .
doi: 10.7668/hbnxb.2018.01.020 |
26 |
Erdal S. Androsterone-induced molecular and physiological changes in maize seedlings in response to chilling stress[J]. Plant Physiol Biochem, 2012, 57: 1-7. DOI:10.1016/j.plaphy.2012.04.016 .
doi: 10.1016/j.plaphy.2012.04.016 |
27 |
梁李宏, 梅新, 林锋, 等. 低温胁迫对腰果幼苗叶片组织结构和生理指标的影响[J]. 生态环境学报, 2009, 18(1): 317-320. DOI:10.16258/j.cnki.1674-5906.2009.01.067 .
doi: 10.16258/j.cnki.1674-5906.2009.01.067 |
28 |
王晨光, 王希, 苍晶, 等. 低温胁迫对水稻幼苗抗冷性的影响[J]. 东北农业大学学报, 2004, 35(2): 205-207. DOI:10.19720/j.cnki.issn.1005-9369.2004.02.019 .
doi: 10.19720/j.cnki.issn.1005-9369.2004.02.019 |
29 |
Agarwal M, Shrivastava N, Padh H. Advances in molecular marker techniques and their applications in plant sciences[J]. Plant Cell Rep, 2008, 27(4): 617-631. DOI:10.1007/s00299-008-0507-z .
doi: 10.1007/s00299-008-0507-z |
30 |
Chagné D, Crowhurst R N, Troggio M, et al. Genome-wide SNP detection, validation, and development of an 8K SNP array for apple[J]. PLoS One, 2012, 7(2): e31745. DOI:10.1371/journal.pone.0031745 .
doi: 10.1371/journal.pone.0031745 |
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